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The impact of SNPs on the interpretation of SAGE and MPSS experimental data

, : The impact of SNPs on the interpretation of SAGE and MPSS experimental data. Nucleic Acids Research 32(20): 6104-6110

Serial Analysis of Gene Expression (SAGE) and Massively Parallel Signature Sequencing (MPSS) are powerful techniques for gene expression analysis. A crucial step in analyzing SAGE and MPSS data is the assignment of experimentally obtained tags to a known transcript. However, tag to transcript assignment is not a straightforward process since alternative tags for a given transcript can also be experimentally obtained.


PMID: 15562001

DOI: 10.1093/nar/gkh937

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