+ Resolve Article
+ Follow Us
Follow on FacebookFollow on Facebook
Follow on TwitterFollow on Twitter

+ Translate
+ Subscribe to Site Feed
GeoScience Most Shared ContentMost Shared Content

A program to test linkage disequilibrium between loci in autotetraploid species

, : A program to test linkage disequilibrium between loci in autotetraploid species. Molecular Ecology Resources 9(3): 746-748

No software currently implements a test of linkage disequilibrium in autotetraploid species. We propose a program, LD4X that performs a Fisher's exact test between pairs of alleles at two loci. All combinations of alleles from two loci are treated in turn. If two alleles of a pair of loci have a nonrandom distribution, the markers are considered as linked. The program was tested on a set of microsatellite markers in synthetic alfalfa populations.


PMID: 21564734

DOI: 10.1111/j.1755-0998.2009.02530.x

Other references

Rodríguez, A.D.; Shi, Y.P., 2000: Verrillin: a highly oxygenated marine diterpene based on the novel verrillane carbon skeleton. Journal of Organic Chemistry 65(18): 5839-5842

Anonymous, 1996: From the Centers for Disease Control and Prevention. Update: respiratory syncytial virus activity--United States, 1995-96 season. JAMA 275(1): 29-29

Dabl, F., 1925: Klasse VI Mollusca, Weichtiere. Tierwelt Deutschlands Teil, 1: 158-200

Strosahl, K.; Quirk, M., 1994: The trouble with carve outs. Business and Health 12(7): 52-52

Kuizon, M.D.; Tajaon, R.T.; Madriaga, J.R.; Perlas, L.A.; Desnacido, J.A., 1989: Assessment of iron status of Filipino pregnant women. Plasma ferritin (PF), erythrocyte protoporphyrin (EP) and hemoglobin (Hb) were used to assess the iron status of 158 Filipino pregnant women included as subjects in the third national nutrition survey conducted by the Food and Nutrition Research I...

Tiflova O.A.; Karu T.I., 1987: Effect of low intensity laser light on nonstationary metabolic processes in escherichia coli cells. Experiments were carried out to study the effect of low intensity light (wave length 632.8 nm) on the growth of E. coli in the presence of the auxin .alpha.-naphthylacetic acid [.alpha.-NAA] or potassium iodide. Correlation curves were presented t...

Ahn, J.; Grun, I.U.; Fernando, L.N., 2002: Antioxidant properties of natural plant extracts containing polyphenolic compounds in cooked ground beef. Thiobarbituric acid-reactive substances (TBARS) values, hexanal content, and sensory analysis were used to evaluate the effectiveness of selected natural antioxidants to reduce warmed-over flavour (WOF) development in cooked ground beef. The contr...

Scotta, M.S.; D.G.acomo, C.; Maggiore, G.; Siena, S.; Ugazio, A.G., 1982: Eucharistic problems for celiac patients. New England Journal of Medicine 307(14): 898-898

Anonymous, 2013: Validacion de fases estacionarias en la cromatografía planar de 111In-pentetreotida. Tras el cese en la fabricaci n de ITLC-SG por Pall-Gelman, es necesaria la validaci n de fases estacionarias alternativas. Validar diferentes fases estacionarias frente a ITLC-SG de Pall-Gelman en la determinaci n de la pureza radioqu mica (PRQ) d...

Rubello, D., 2005: Timing for evaluating "specific" binding of 99mTc-sulesomab in peripheral bone infection. Journal of Nuclear Medicine 46(2): 382; Author Reply 382-3